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Peer-reviewed veterinary case report

Engineered enzymes for enantioselective nucleophilic aromatic substitutions.

Year:
2025
Authors:
Lister TM et al.
Affiliation:
Manchester Institute of Biotechnology · United Kingdom

Abstract

Nucleophilic aromatic substitutions (S<sub>N</sub>Ar) are among the most widely used processes in the pharmaceutical and agrochemical industries<sup>1-4</sup>, allowing convergent assembly of complex molecules through C-C and C-X (X = O, N, S) bond formation. S<sub>N</sub>Ar reactions are typically carried out using forcing conditions, involving polar aprotic solvents, stoichiometric bases and elevated temperatures, which do not allow for control over reaction selectivity. Despite the importance of S<sub>N</sub>Ar chemistry, there are only a handful of selective catalytic methods reported that rely on small organic hydrogen-bonding or phase-transfer catalysts<sup>5-11</sup>. Here we establish a biocatalytic approach to stereoselective S<sub>N</sub>Ar chemistry by uncovering promiscuous S<sub>N</sub>Ar activity in a designed enzyme featuring an activated arginine<sup>12</sup>. This activity was optimized over successive rounds of directed evolution to afford an engineered biocatalyst, S<sub>N</sub>Ar1.3, that is 160-fold more efficient than the parent and promotes the coupling of electron-deficient arenes with carbon nucleophiles with near-perfect stereocontrol (>99% enantiomeric excess (e.e.)). S<sub>N</sub>Ar1.3 can operate at a rate of 0.15 s<sup>-1</sup>, perform more than 4,000 turnovers and can accept a broad range of electrophilic and nucleophilic coupling partners, including those that allow construction of challenging 1,1-diaryl quaternary stereocentres. Biochemical, structural and computational studies provide insights into the catalytic mechanism of S<sub>N</sub>Ar1.3, including the emergence of a halide binding pocket shaped by key catalytic residues Arg124 and Asp125. This study brings a landmark synthetic reaction into the realm of biocatalysis to provide an efficient and versatile platform for catalytic S<sub>N</sub>Ar chemistry.

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Original publication: https://europepmc.org/article/MED/39814071