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Peer-reviewed veterinary case report

Protocol for PPP1R15A-inhibited mouse model establishment with subcutaneous B16F1 tumor and single-cell analysis.

Journal:
STAR protocols
Year:
2023
Authors:
Wang, Rongjing et al.
Affiliation:
Shanghai Institute of Nutrition and Health · China
Species:
rodent

Abstract

Here, we present a protocol for exploring the effects of PPP1R15A inhibitor, Sephin1, on antitumor immunity of B16F1 subcutaneous tumor in mice. We describe steps for constructing single-cell transcriptome and TCR libraries, sequencing, and using sequencing data for the integration of expression and TCR data. We then detail procedures for gene differentiation, regulon and cell-cell communication analysis, and validation of single-cell analysis results. For complete details on the use and execution of this protocol, please refer to Wang et al..

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Original publication: https://pubmed.ncbi.nlm.nih.gov/37756156/